Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC9.11□□□□□ -0.95
TcraP01849 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC9.11□□□□□ -0.95
TcraP01849 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
TcraP01849 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
TcraP01849 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
TcraP01849 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC9.11□□□□□ -0.95
TcraP01849 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC9.11□□□□□ -0.95
TcraP01849 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
TcraP01849 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC9.11□□□□□ -0.95
TcraP01849 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC9.11□□□□□ -0.95
TcraP01849 AC126408.1-201ENSMUST00000225184 523 ntBASIC9.11□□□□□ -0.95
TcraP01849 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC9.11□□□□□ -0.95
TcraP01849 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
TcraP01849 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
TcraP01849 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Gm37849-201ENSMUST00000194722 1881 ntBASIC9.11□□□□□ -0.95
TcraP01849 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TcraP01849 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC9.1□□□□□ -0.95
TcraP01849 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
TcraP01849 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
TcraP01849 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
TcraP01849 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
TcraP01849 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
TcraP01849 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC9.1□□□□□ -0.95
TcraP01849 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC9.1□□□□□ -0.95
TcraP01849 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.1□□□□□ -0.95
TcraP01849 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Gm12537-201ENSMUST00000119266 1002 ntBASIC9.1□□□□□ -0.95
TcraP01849 Gm12070-201ENSMUST00000119551 1002 ntBASIC9.1□□□□□ -0.95
TcraP01849 Gm12671-201ENSMUST00000119978 1002 ntBASIC9.1□□□□□ -0.95
TcraP01849 Gm13292-201ENSMUST00000120014 1000 ntBASIC9.1□□□□□ -0.95
TcraP01849 Gm12403-201ENSMUST00000121384 959 ntBASIC9.1□□□□□ -0.95
TcraP01849 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC9.1□□□□□ -0.95
TcraP01849 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC9.1□□□□□ -0.95
TcraP01849 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Gm10359-201ENSMUST00000180167 1002 ntBASIC9.1□□□□□ -0.95
TcraP01849 Gm12033-201ENSMUST00000180654 1002 ntBASIC9.1□□□□□ -0.95
TcraP01849 Gm5559-201ENSMUST00000180755 1002 ntBASIC9.1□□□□□ -0.95
TcraP01849 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Gm4335-201ENSMUST00000182581 1004 ntBASIC9.1□□□□□ -0.95
TcraP01849 Gm27772-201ENSMUST00000184900 187 ntBASIC9.1□□□□□ -0.95
TcraP01849 Gm7063-201ENSMUST00000186840 981 ntBASIC9.1□□□□□ -0.95
TcraP01849 Gm38294-201ENSMUST00000192831 381 ntBASIC9.1□□□□□ -0.95
TcraP01849 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC9.1□□□□□ -0.95
TcraP01849 Gm18905-201ENSMUST00000205454 928 ntBASIC9.1□□□□□ -0.95
TcraP01849 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
TcraP01849 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 AC122305.4-201ENSMUST00000216159 1206 ntBASIC9.1□□□□□ -0.95
TcraP01849 AC139382.1-201ENSMUST00000221402 498 ntBASIC9.1□□□□□ -0.95
TcraP01849 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms