Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hcn1O88704 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.97□□□□□ -0.49
Hcn1O88704 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hcn1O88704 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hcn1O88704 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Hcn1O88704 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hcn1O88704 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hcn1O88704 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Hcn1O88704 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Hcn1O88704 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hcn1O88704 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Hcn1O88704 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hcn1O88704 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Hcn1O88704 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.96□□□□□ -0.49
Hcn1O88704 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Hcn1O88704 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.96□□□□□ -0.49
Hcn1O88704 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.96□□□□□ -0.49
Hcn1O88704 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Hcn1O88704 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 Gm5187-201ENSMUST00000117317 991 ntBASIC11.96□□□□□ -0.49
Hcn1O88704 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Hcn1O88704 Gm12363-201ENSMUST00000122250 668 ntBASIC11.96□□□□□ -0.49
Hcn1O88704 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 Gm25927-201ENSMUST00000175058 117 ntBASIC11.96□□□□□ -0.49
Hcn1O88704 Gm4768-201ENSMUST00000206199 686 ntBASIC11.96□□□□□ -0.49
Hcn1O88704 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 Gm9899-201ENSMUST00000065519 555 ntBASIC11.96□□□□□ -0.49
Hcn1O88704 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Hcn1O88704 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Hcn1O88704 Gm10478-201ENSMUST00000084451 396 ntBASIC11.96□□□□□ -0.49
Hcn1O88704 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcn1O88704 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hcn1O88704 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Hcn1O88704 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
Hcn1O88704 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.96□□□□□ -0.5
Hcn1O88704 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hcn1O88704 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Hcn1O88704 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hcn1O88704 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Hcn1O88704 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.95□□□□□ -0.5
Hcn1O88704 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Hcn1O88704 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Hcn1O88704 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.95□□□□□ -0.5
Hcn1O88704 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.95□□□□□ -0.5
Hcn1O88704 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.95□□□□□ -0.5
Hcn1O88704 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.95□□□□□ -0.5
Hcn1O88704 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.95□□□□□ -0.5
Hcn1O88704 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Snora73a-201ENSMUST00000082453 205 ntBASIC11.95□□□□□ -0.5
Hcn1O88704 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Hcn1O88704 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
Hcn1O88704 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcn1O88704 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.95□□□□□ -0.5
Hcn1O88704 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Hcn1O88704 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms