Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh9F8VPK8 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh9F8VPK8 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Gm9022-201ENSMUST00000182482 992 ntBASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Gm27243-201ENSMUST00000183964 521 ntBASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Gm29127-201ENSMUST00000188304 517 ntBASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Gm44882-201ENSMUST00000205702 802 ntBASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Map1b-203ENSMUST00000223725 2669 ntBASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh9F8VPK8 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh9F8VPK8 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Gm11597-201ENSMUST00000121423 964 ntBASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Gm18187-201ENSMUST00000196476 984 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms