Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Gm11637-201ENSMUST00000120601 592 ntBASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Gm10156-201ENSMUST00000122364 462 ntBASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Proscos-202ENSMUST00000178990 666 ntBASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Gm37042-201ENSMUST00000193816 581 ntBASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh1F7BJK1 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms