Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Cts7-204ENSMUST00000225321 1257 ntBASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gm9899-201ENSMUST00000065519 555 ntBASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.11■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gm2991-201ENSMUST00000173338 480 ntBASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gm30285-201ENSMUST00000214614 422 ntBASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gm8712-201ENSMUST00000221090 701 ntBASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC15.09■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC15.09■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gm37513-201ENSMUST00000194830 2268 ntBASIC15.09■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gm38378-201ENSMUST00000195153 2268 ntBASIC15.09■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Gm24934-201ENSMUST00000103764 111 ntBASIC15.09■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Atg4a-psA0A0G2JFS9 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms