Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 AC153872.1-201ENSMUST00000199539 128 ntBASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 AC122305.4-201ENSMUST00000216159 1206 ntBASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 AC138604.1-201ENSMUST00000226969 739 ntBASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 AC156016.3-201ENSMUST00000228623 344 ntBASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Gm37422-201ENSMUST00000193794 4718 ntBASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Gm15653-201ENSMUST00000119247 907 ntBASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Mir6990-201ENSMUST00000183724 91 ntBASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Gm19184-201ENSMUST00000196798 928 ntBASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Gm5425-201ENSMUST00000214125 459 ntBASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms