Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Gm23949-201ENSMUST00000104027 127 ntBASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Gm28450-201ENSMUST00000187349 638 ntBASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Gm18212-201ENSMUST00000211678 889 ntBASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Gm7722-201ENSMUST00000120646 741 ntBASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn8aQ9WTU3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Gm270-201ENSMUST00000223010 976 ntBASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms