Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm14270-201ENSMUST00000118388 846 ntBASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm7940-201ENSMUST00000218195 769 ntBASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Gm11500-201ENSMUST00000118237 601 ntBASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Gm5706-201ENSMUST00000181525 993 ntBASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 BC106175-202ENSMUST00000219344 1213 ntBASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a4Q9QZR9 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Gm12274-201ENSMUST00000120062 385 ntBASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Gm27956-201ENSMUST00000175604 260 ntBASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Gm10807-201ENSMUST00000177134 795 ntBASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Gm10263-201ENSMUST00000085163 300 ntBASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms