Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
OtofQ9ESF1 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
OtofQ9ESF1 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
OtofQ9ESF1 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
OtofQ9ESF1 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
OtofQ9ESF1 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.32□□□□□ -0.44
OtofQ9ESF1 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
OtofQ9ESF1 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.32□□□□□ -0.44
OtofQ9ESF1 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
OtofQ9ESF1 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
OtofQ9ESF1 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
OtofQ9ESF1 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
OtofQ9ESF1 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
OtofQ9ESF1 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.32□□□□□ -0.44
OtofQ9ESF1 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
OtofQ9ESF1 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
OtofQ9ESF1 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
OtofQ9ESF1 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
OtofQ9ESF1 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.31□□□□□ -0.44
OtofQ9ESF1 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Gm11450-201ENSMUST00000121144 333 ntBASIC12.31□□□□□ -0.44
OtofQ9ESF1 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Mir6546-201ENSMUST00000184460 62 ntBASIC12.31□□□□□ -0.44
OtofQ9ESF1 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Gm44882-201ENSMUST00000205702 802 ntBASIC12.31□□□□□ -0.44
OtofQ9ESF1 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
OtofQ9ESF1 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.31□□□□□ -0.44
OtofQ9ESF1 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
OtofQ9ESF1 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.3□□□□□ -0.44
OtofQ9ESF1 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.3□□□□□ -0.44
OtofQ9ESF1 Gm7722-201ENSMUST00000120646 741 ntBASIC12.3□□□□□ -0.44
OtofQ9ESF1 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.3□□□□□ -0.44
OtofQ9ESF1 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.3□□□□□ -0.44
OtofQ9ESF1 Gm22902-201ENSMUST00000158488 302 ntBASIC12.3□□□□□ -0.44
OtofQ9ESF1 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.3□□□□□ -0.44
OtofQ9ESF1 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Gm17931-201ENSMUST00000208132 634 ntBASIC12.3□□□□□ -0.44
OtofQ9ESF1 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.3□□□□□ -0.44
OtofQ9ESF1 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.3□□□□□ -0.44
OtofQ9ESF1 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.3□□□□□ -0.44
OtofQ9ESF1 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.3□□□□□ -0.44
OtofQ9ESF1 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.3□□□□□ -0.44
OtofQ9ESF1 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
OtofQ9ESF1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms