Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Gm28911-201ENSMUST00000188837 117 ntBASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Gm7287-201ENSMUST00000205267 602 ntBASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnft1Q9DCN7 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Gm2423-201ENSMUST00000074863 733 ntBASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnft1Q9DCN7 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 Gm11803-201ENSMUST00000119966 444 ntBASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 Rmrp-201ENSMUST00000157463 271 ntBASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 Gm8810-201ENSMUST00000172895 754 ntBASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 Gm37497-201ENSMUST00000195830 798 ntBASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnft1Q9DCN7 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms