Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.74■□□□□ 0.11
Chmp4bQ9D8B3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.74■□□□□ 0.11
Chmp4bQ9D8B3 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.74■□□□□ 0.11
Chmp4bQ9D8B3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp4bQ9D8B3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp4bQ9D8B3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
Chmp4bQ9D8B3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.74■□□□□ 0.11
Chmp4bQ9D8B3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp4bQ9D8B3 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Chmp4bQ9D8B3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp4bQ9D8B3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC15.74■□□□□ 0.11
Chmp4bQ9D8B3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp4bQ9D8B3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp4bQ9D8B3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.74■□□□□ 0.11
Chmp4bQ9D8B3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Gm43721-201ENSMUST00000199677 2313 ntBASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Mir1247-201ENSMUST00000116706 82 ntBASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Gm12314-201ENSMUST00000118104 538 ntBASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Mir1982-201ENSMUST00000157368 74 ntBASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Gm6222-202ENSMUST00000182143 629 ntBASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Gm27514-201ENSMUST00000183692 110 ntBASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Ighv1-60-201ENSMUST00000195816 405 ntBASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4bQ9D8B3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Gm13315-201ENSMUST00000120376 991 ntBASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Gm9022-201ENSMUST00000182482 992 ntBASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Gm27243-201ENSMUST00000183964 521 ntBASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Gm27390-201ENSMUST00000184516 176 ntBASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 AC098716.1-201ENSMUST00000213527 703 ntBASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Gm9279-201ENSMUST00000223175 1606 ntBASIC15.72■□□□□ 0.11
Chmp4bQ9D8B3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Gm44758-201ENSMUST00000206096 2068 ntBASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Gm5053-201ENSMUST00000208361 1678 ntBASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Gm13736-201ENSMUST00000119272 253 ntBASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Gm11597-201ENSMUST00000121423 964 ntBASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms