Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 AC153962.4-201ENSMUST00000217878 242 ntBASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 AC130829.1-201ENSMUST00000221548 494 ntBASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 AC192088.1-201ENSMUST00000227561 301 ntBASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Mrpl55Q9CZ83 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Mrpl55Q9CZ83 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.08
Mrpl55Q9CZ83 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Mrpl55Q9CZ83 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Mrpl55Q9CZ83 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Mrpl55Q9CZ83 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Mrpl55Q9CZ83 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.08
Mrpl55Q9CZ83 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC8.34□□□□□ -1.08
Mrpl55Q9CZ83 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 AC126549.2-201ENSMUST00000223997 1976 ntBASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Gm14730-201ENSMUST00000122378 1045 ntBASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Gm15429-201ENSMUST00000151268 798 ntBASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Gm27486-201ENSMUST00000184923 80 ntBASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Gm7498-201ENSMUST00000203282 1084 ntBASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Mir497b-201ENSMUST00000093601 125 ntBASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Zfp446-201ENSMUST00000045810 4615 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Gm19165-201ENSMUST00000204453 1982 ntBASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Mrpl55Q9CZ83 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms