Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3b1Q99NB9 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3b1Q99NB9 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.27□□□□□ -0.28
Sf3b1Q99NB9 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3b1Q99NB9 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.27□□□□□ -0.28
Sf3b1Q99NB9 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3b1Q99NB9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Gm7857-201ENSMUST00000117957 358 ntBASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Gm4909-201ENSMUST00000118749 794 ntBASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Gm14208-201ENSMUST00000119645 678 ntBASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3b1Q99NB9 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Gm12015-201ENSMUST00000117065 843 ntBASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Gm13996-201ENSMUST00000118456 430 ntBASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b1Q99NB9 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Gm6963-201ENSMUST00000147879 379 ntBASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Mir6927-201ENSMUST00000184494 71 ntBASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Gm19187-201ENSMUST00000206781 892 ntBASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Gm45224-201ENSMUST00000208203 414 ntBASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Nsd1-205ENSMUST00000224693 852 ntBASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b1Q99NB9 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms