Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Gm11941-201ENSMUST00000119904 610 ntBASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Gm11675-201ENSMUST00000121873 832 ntBASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Gm29155-201ENSMUST00000185910 269 ntBASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Gm18038-201ENSMUST00000197900 485 ntBASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx6-1Q99MA9 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Gm25881-201ENSMUST00000157783 103 ntBASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Mir6546-201ENSMUST00000184460 62 ntBASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms