Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm7593-201ENSMUST00000187246 644 ntBASIC13.16□□□□□ -0.3
Clp1Q99LI9 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.16□□□□□ -0.3
Clp1Q99LI9 Gm4157-201ENSMUST00000211647 679 ntBASIC13.16□□□□□ -0.3
Clp1Q99LI9 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.15□□□□□ -0.3
Clp1Q99LI9 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.15□□□□□ -0.3
Clp1Q99LI9 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.15□□□□□ -0.3
Clp1Q99LI9 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Ighv1-48-201ENSMUST00000191795 294 ntBASIC13.15□□□□□ -0.3
Clp1Q99LI9 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.15□□□□□ -0.3
Clp1Q99LI9 Gm45398-201ENSMUST00000210561 165 ntBASIC13.15□□□□□ -0.3
Clp1Q99LI9 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.15□□□□□ -0.3
Clp1Q99LI9 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.15□□□□□ -0.3
Clp1Q99LI9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clp1Q99LI9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.15□□□□□ -0.3
Clp1Q99LI9 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Clp1Q99LI9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Clp1Q99LI9 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.31
Clp1Q99LI9 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Clp1Q99LI9 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.14□□□□□ -0.31
Clp1Q99LI9 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Gm12857-201ENSMUST00000117678 592 ntBASIC13.14□□□□□ -0.31
Clp1Q99LI9 Gm13809-201ENSMUST00000117921 597 ntBASIC13.14□□□□□ -0.31
Clp1Q99LI9 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.14□□□□□ -0.31
Clp1Q99LI9 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.14□□□□□ -0.31
Clp1Q99LI9 Gm27530-201ENSMUST00000184096 98 ntBASIC13.14□□□□□ -0.31
Clp1Q99LI9 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.14□□□□□ -0.31
Clp1Q99LI9 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.14□□□□□ -0.31
Clp1Q99LI9 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms