Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb5Q91XZ5 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.69□□□□□ -0.06
Pcdhb5Q91XZ5 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb5Q91XZ5 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb5Q91XZ5 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb5Q91XZ5 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.69□□□□□ -0.06
Pcdhb5Q91XZ5 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb5Q91XZ5 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb5Q91XZ5 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.69□□□□□ -0.06
Pcdhb5Q91XZ5 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb5Q91XZ5 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb5Q91XZ5 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb5Q91XZ5 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb5Q91XZ5 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Pcdhb5Q91XZ5 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb5Q91XZ5 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb5Q91XZ5 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb5Q91XZ5 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb5Q91XZ5 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Mir1943-201ENSMUST00000158276 73 ntBASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Gm18038-201ENSMUST00000197900 485 ntBASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Gm43962-201ENSMUST00000203898 190 ntBASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb5Q91XZ5 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Gm17827-201ENSMUST00000211825 742 ntBASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb5Q91XZ5 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb5Q91XZ5 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb5Q91XZ5 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Pcdhb5Q91XZ5 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb5Q91XZ5 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb5Q91XZ5 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb5Q91XZ5 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb5Q91XZ5 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb5Q91XZ5 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb5Q91XZ5 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.66□□□□□ -0.06
Pcdhb5Q91XZ5 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.66□□□□□ -0.06
Pcdhb5Q91XZ5 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb5Q91XZ5 Gm15515-201ENSMUST00000117827 822 ntBASIC14.66□□□□□ -0.06
Pcdhb5Q91XZ5 Gm12616-201ENSMUST00000118594 382 ntBASIC14.66□□□□□ -0.06
Pcdhb5Q91XZ5 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdhb5Q91XZ5 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.66□□□□□ -0.06
Pcdhb5Q91XZ5 Gm12624-201ENSMUST00000177615 382 ntBASIC14.66□□□□□ -0.06
Pcdhb5Q91XZ5 Gm12621-201ENSMUST00000177760 382 ntBASIC14.66□□□□□ -0.06
Pcdhb5Q91XZ5 Gm12615-201ENSMUST00000177970 382 ntBASIC14.66□□□□□ -0.06
Pcdhb5Q91XZ5 Gm12622-201ENSMUST00000177975 382 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms