Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdhb6Q91XZ4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Gm6023-201ENSMUST00000118217 606 ntBASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Gm13875-201ENSMUST00000120162 282 ntBASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 AY702102-202ENSMUST00000194651 1173 ntBASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Gm8227-201ENSMUST00000223306 571 ntBASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb6Q91XZ4 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Gm44958-201ENSMUST00000203734 736 ntBASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb6Q91XZ4 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb6Q91XZ4 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb6Q91XZ4 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb6Q91XZ4 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb6Q91XZ4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb6Q91XZ4 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhb6Q91XZ4 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb6Q91XZ4 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb6Q91XZ4 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhb6Q91XZ4 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb6Q91XZ4 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms