Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm37448-201ENSMUST00000192795 697 ntBASIC12.38□□□□□ -0.43
Vsx1Q91V10 Gm8365-201ENSMUST00000197334 648 ntBASIC12.38□□□□□ -0.43
Vsx1Q91V10 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.38□□□□□ -0.43
Vsx1Q91V10 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.38□□□□□ -0.43
Vsx1Q91V10 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.38□□□□□ -0.43
Vsx1Q91V10 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.38□□□□□ -0.43
Vsx1Q91V10 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx1Q91V10 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx1Q91V10 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx1Q91V10 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vsx1Q91V10 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx1Q91V10 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx1Q91V10 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx1Q91V10 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx1Q91V10 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Vsx1Q91V10 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vsx1Q91V10 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx1Q91V10 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx1Q91V10 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx1Q91V10 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx1Q91V10 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx1Q91V10 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx1Q91V10 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vsx1Q91V10 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx1Q91V10 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vsx1Q91V10 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Gm15711-201ENSMUST00000118889 535 ntBASIC12.37□□□□□ -0.43
Vsx1Q91V10 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.37□□□□□ -0.43
Vsx1Q91V10 Gm14999-201ENSMUST00000121039 624 ntBASIC12.37□□□□□ -0.43
Vsx1Q91V10 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.37□□□□□ -0.43
Vsx1Q91V10 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Gm17391-201ENSMUST00000171036 126 ntBASIC12.37□□□□□ -0.43
Vsx1Q91V10 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.37□□□□□ -0.43
Vsx1Q91V10 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.37□□□□□ -0.43
Vsx1Q91V10 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.37□□□□□ -0.43
Vsx1Q91V10 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Vsx1Q91V10 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.37□□□□□ -0.43
Vsx1Q91V10 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.37□□□□□ -0.43
Vsx1Q91V10 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Gm23949-201ENSMUST00000104027 127 ntBASIC12.36□□□□□ -0.43
Vsx1Q91V10 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.36□□□□□ -0.43
Vsx1Q91V10 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.36□□□□□ -0.43
Vsx1Q91V10 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx1Q91V10 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx1Q91V10 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms