Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fam228aQ8CDW1 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Fam228aQ8CDW1 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Fam228aQ8CDW1 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.31
Fam228aQ8CDW1 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Fam228aQ8CDW1 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Fam228aQ8CDW1 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Fam228aQ8CDW1 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Gm17208-201ENSMUST00000168388 535 ntBASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Fam228aQ8CDW1 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam228aQ8CDW1 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Fam228aQ8CDW1 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam228aQ8CDW1 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Fam228aQ8CDW1 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam228aQ8CDW1 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam228aQ8CDW1 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Fam228aQ8CDW1 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Fam228aQ8CDW1 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Fam228aQ8CDW1 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam228aQ8CDW1 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam228aQ8CDW1 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Fam228aQ8CDW1 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Fam228aQ8CDW1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Fam228aQ8CDW1 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Fam228aQ8CDW1 Gm38671-201ENSMUST00000200573 130 ntBASIC13.07□□□□□ -0.32
Fam228aQ8CDW1 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.07□□□□□ -0.32
Fam228aQ8CDW1 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Fam228aQ8CDW1 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam228aQ8CDW1 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam228aQ8CDW1 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms