Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Gm19994-201ENSMUST00000217086 586 ntBASIC14.23□□□□□ -0.13
Rtp1Q8C8C1 Gm6867-201ENSMUST00000219165 425 ntBASIC14.23□□□□□ -0.13
Rtp1Q8C8C1 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rtp1Q8C8C1 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.23□□□□□ -0.13
Rtp1Q8C8C1 Gm807-202ENSMUST00000224929 408 ntBASIC14.23□□□□□ -0.13
Rtp1Q8C8C1 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rtp1Q8C8C1 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rtp1Q8C8C1 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Rtp1Q8C8C1 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rtp1Q8C8C1 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rtp1Q8C8C1 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rtp1Q8C8C1 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rtp1Q8C8C1 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rtp1Q8C8C1 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rtp1Q8C8C1 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rtp1Q8C8C1 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.23□□□□□ -0.13
Rtp1Q8C8C1 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rtp1Q8C8C1 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Gm23218-201ENSMUST00000158124 276 ntBASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Gm27530-201ENSMUST00000184096 98 ntBASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Gm7395-201ENSMUST00000216059 1045 ntBASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rtp1Q8C8C1 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Gm4726-201ENSMUST00000135604 736 ntBASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Gm6019-201ENSMUST00000148369 736 ntBASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Gm5852-201ENSMUST00000194119 1021 ntBASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Gm5542-201ENSMUST00000195485 1089 ntBASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Gm26448-201ENSMUST00000082446 203 ntBASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Gm3765-201ENSMUST00000130985 1447 ntBASIC14.21□□□□□ -0.13
Rtp1Q8C8C1 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rtp1Q8C8C1 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rtp1Q8C8C1 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rtp1Q8C8C1 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rtp1Q8C8C1 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 229.5 ms