Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Gm15711-201ENSMUST00000118889 535 ntBASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Gm9211-201ENSMUST00000182882 975 ntBASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Gm22133-201ENSMUST00000102082 109 ntBASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Gm24934-201ENSMUST00000103764 111 ntBASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Gm24231-201ENSMUST00000104315 133 ntBASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Gm13611-201ENSMUST00000118269 318 ntBASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcal1Q8BJL0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Gm11989-201ENSMUST00000117240 672 ntBASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Gm11362-201ENSMUST00000118838 850 ntBASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Mir1943-201ENSMUST00000158276 73 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms