Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Daam2-202ENSMUST00000224595 1926 ntBASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Mir1247-201ENSMUST00000116706 82 ntBASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Gm24548-201ENSMUST00000158650 108 ntBASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Gm38266-201ENSMUST00000194931 421 ntBASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Gm5904-201ENSMUST00000210286 865 ntBASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc2Q6PDG5 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Gm13492-201ENSMUST00000119772 665 ntBASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Gm13786-201ENSMUST00000122371 333 ntBASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Mospd4-201ENSMUST00000180618 576 ntBASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Mir8109-201ENSMUST00000184375 117 ntBASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc2Q6PDG5 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Gm15370-201ENSMUST00000117158 253 ntBASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Gm12241-201ENSMUST00000118330 726 ntBASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Gm37489-201ENSMUST00000191883 159 ntBASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms