Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
VcanQ62059 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
VcanQ62059 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
VcanQ62059 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
VcanQ62059 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VcanQ62059 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
VcanQ62059 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VcanQ62059 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VcanQ62059 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
VcanQ62059 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VcanQ62059 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VcanQ62059 Gm8731-201ENSMUST00000118088 412 ntBASIC11.4□□□□□ -0.58
VcanQ62059 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.4□□□□□ -0.58
VcanQ62059 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.4□□□□□ -0.58
VcanQ62059 Gm12407-201ENSMUST00000180219 324 ntBASIC11.4□□□□□ -0.58
VcanQ62059 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC11.4□□□□□ -0.58
VcanQ62059 Gm45085-201ENSMUST00000209100 441 ntBASIC11.4□□□□□ -0.58
VcanQ62059 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.4□□□□□ -0.58
VcanQ62059 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
VcanQ62059 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
VcanQ62059 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
VcanQ62059 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.4□□□□□ -0.59
VcanQ62059 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
VcanQ62059 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
VcanQ62059 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
VcanQ62059 Gm26286-201ENSMUST00000104166 134 ntBASIC11.39□□□□□ -0.59
VcanQ62059 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
VcanQ62059 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.39□□□□□ -0.59
VcanQ62059 Mir6953-201ENSMUST00000184745 68 ntBASIC11.39□□□□□ -0.59
VcanQ62059 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC11.39□□□□□ -0.59
VcanQ62059 CT030652.1-201ENSMUST00000227377 1235 ntBASIC11.39□□□□□ -0.59
VcanQ62059 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.39□□□□□ -0.59
VcanQ62059 Mir339-201ENSMUST00000083659 96 ntBASIC11.39□□□□□ -0.59
VcanQ62059 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
VcanQ62059 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.39□□□□□ -0.59
VcanQ62059 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
VcanQ62059 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
VcanQ62059 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
VcanQ62059 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
VcanQ62059 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
VcanQ62059 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
VcanQ62059 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
VcanQ62059 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Gm15004-201ENSMUST00000119192 630 ntBASIC11.39□□□□□ -0.59
VcanQ62059 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC11.39□□□□□ -0.59
VcanQ62059 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC11.39□□□□□ -0.59
VcanQ62059 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.39□□□□□ -0.59
VcanQ62059 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
VcanQ62059 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Gm13445-201ENSMUST00000121664 307 ntBASIC11.39□□□□□ -0.59
VcanQ62059 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.39□□□□□ -0.59
VcanQ62059 Gm18561-201ENSMUST00000206027 804 ntBASIC11.39□□□□□ -0.59
VcanQ62059 Gm45094-201ENSMUST00000207013 617 ntBASIC11.39□□□□□ -0.59
VcanQ62059 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
VcanQ62059 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.39□□□□□ -0.59
VcanQ62059 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VcanQ62059 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VcanQ62059 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
VcanQ62059 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VcanQ62059 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VcanQ62059 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
VcanQ62059 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.38□□□□□ -0.59
VcanQ62059 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.38□□□□□ -0.59
VcanQ62059 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VcanQ62059 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
VcanQ62059 Gm16459-201ENSMUST00000121443 686 ntBASIC11.38□□□□□ -0.59
VcanQ62059 Gm13981-201ENSMUST00000122360 447 ntBASIC11.38□□□□□ -0.59
VcanQ62059 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VcanQ62059 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC11.38□□□□□ -0.59
VcanQ62059 Gm34379-201ENSMUST00000195036 290 ntBASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms