Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Sox17Q61473 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox17Q61473 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox17Q61473 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.69□□□□□ -0.54
Sox17Q61473 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
Sox17Q61473 Gm15371-201ENSMUST00000117057 784 ntBASIC11.69□□□□□ -0.54
Sox17Q61473 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.69□□□□□ -0.54
Sox17Q61473 Gm44397-201ENSMUST00000195950 113 ntBASIC11.69□□□□□ -0.54
Sox17Q61473 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.69□□□□□ -0.54
Sox17Q61473 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox17Q61473 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Sox17Q61473 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Sox17Q61473 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sox17Q61473 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox17Q61473 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox17Q61473 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Sox17Q61473 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Sox17Q61473 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox17Q61473 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox17Q61473 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Sox17Q61473 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sox17Q61473 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sox17Q61473 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Gm14719-201ENSMUST00000121891 340 ntBASIC11.68□□□□□ -0.54
Sox17Q61473 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.68□□□□□ -0.54
Sox17Q61473 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.68□□□□□ -0.54
Sox17Q61473 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.68□□□□□ -0.54
Sox17Q61473 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Sox17Q61473 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox17Q61473 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sox17Q61473 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.68□□□□□ -0.54
Sox17Q61473 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox17Q61473 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox17Q61473 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.67□□□□□ -0.54
Sox17Q61473 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.67□□□□□ -0.54
Sox17Q61473 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.67□□□□□ -0.54
Sox17Q61473 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Sox17Q61473 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms