Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Gm7857-201ENSMUST00000117957 358 ntBASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.3□□□□□ -0.28
Shroom1Q5SX79 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Nsd1-205ENSMUST00000224693 852 ntBASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.3□□□□□ -0.28
Shroom1Q5SX79 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Gm27341-201ENSMUST00000183570 106 ntBASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Gm43138-201ENSMUST00000199123 708 ntBASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.29□□□□□ -0.28
Shroom1Q5SX79 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shroom1Q5SX79 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms