Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Gm6485-201ENSMUST00000160676 439 ntBASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Gm15515-201ENSMUST00000117827 822 ntBASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Gm12196-201ENSMUST00000120954 262 ntBASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Gm16397-201ENSMUST00000122201 494 ntBASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc88aQ5SNZ0 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Gm9358-201ENSMUST00000183067 927 ntBASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Gm43962-201ENSMUST00000203898 190 ntBASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Gm17827-201ENSMUST00000211825 742 ntBASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88aQ5SNZ0 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88aQ5SNZ0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88aQ5SNZ0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88aQ5SNZ0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88aQ5SNZ0 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88aQ5SNZ0 Gm11892-201ENSMUST00000117711 1202 ntBASIC14.23□□□□□ -0.13
Ccdc88aQ5SNZ0 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.23□□□□□ -0.13
Ccdc88aQ5SNZ0 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88aQ5SNZ0 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88aQ5SNZ0 Gm1821-202ENSMUST00000227415 750 ntBASIC14.23□□□□□ -0.13
Ccdc88aQ5SNZ0 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88aQ5SNZ0 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.23□□□□□ -0.13
Ccdc88aQ5SNZ0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88aQ5SNZ0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ccdc88aQ5SNZ0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88aQ5SNZ0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc88aQ5SNZ0 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc88aQ5SNZ0 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88aQ5SNZ0 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88aQ5SNZ0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88aQ5SNZ0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88aQ5SNZ0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88aQ5SNZ0 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms