Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Gm17192-201ENSMUST00000169031 511 ntBASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Gm8451-201ENSMUST00000170338 447 ntBASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Gm7536-201ENSMUST00000077389 444 ntBASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Gm5453-201ENSMUST00000080866 447 ntBASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Gm34379-201ENSMUST00000195036 290 ntBASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Gm3726-201ENSMUST00000203110 785 ntBASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Gm14993-201ENSMUST00000121180 164 ntBASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps13aQ5H8C4 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vps13aQ5H8C4 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vps13aQ5H8C4 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Vps13aQ5H8C4 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vps13aQ5H8C4 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC12.02□□□□□ -0.48
Vps13aQ5H8C4 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vps13aQ5H8C4 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.02□□□□□ -0.48
Vps13aQ5H8C4 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vps13aQ5H8C4 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Vps13aQ5H8C4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Vps13aQ5H8C4 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vps13aQ5H8C4 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.02□□□□□ -0.48
Vps13aQ5H8C4 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vps13aQ5H8C4 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Vps13aQ5H8C4 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vps13aQ5H8C4 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vps13aQ5H8C4 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vps13aQ5H8C4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 Gm12791-201ENSMUST00000120788 655 ntBASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 Gm22846-201ENSMUST00000157706 270 ntBASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms