Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Mir339-201ENSMUST00000083659 96 ntBASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.28□□□□□ -0.28
Syne3Q4FZC9 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syne3Q4FZC9 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Syne3Q4FZC9 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Syne3Q4FZC9 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Syne3Q4FZC9 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Syne3Q4FZC9 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Syne3Q4FZC9 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Syne3Q4FZC9 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Syne3Q4FZC9 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Syne3Q4FZC9 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Syne3Q4FZC9 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Gm8062-201ENSMUST00000139696 444 ntBASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms