Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Gm12058-201ENSMUST00000118614 437 ntBASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Gm6023-201ENSMUST00000118217 606 ntBASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Gm6007-201ENSMUST00000208170 823 ntBASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ctdnep1Q3TP92 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Gm14999-201ENSMUST00000121039 624 ntBASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Gm45880-201ENSMUST00000213041 853 ntBASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ctdnep1Q3TP92 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms