Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a2Q07643 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a2Q07643 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a2Q07643 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a2Q07643 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a2Q07643 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Col9a2Q07643 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Col9a2Q07643 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Col9a2Q07643 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a2Q07643 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.5□□□□□ -0.25
Col9a2Q07643 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a2Q07643 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.5□□□□□ -0.25
Col9a2Q07643 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a2Q07643 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a2Q07643 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a2Q07643 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a2Q07643 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a2Q07643 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a2Q07643 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a2Q07643 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Col9a2Q07643 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a2Q07643 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.5□□□□□ -0.25
Col9a2Q07643 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.5□□□□□ -0.25
Col9a2Q07643 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Col9a2Q07643 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.5□□□□□ -0.25
Col9a2Q07643 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.5□□□□□ -0.25
Col9a2Q07643 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a2Q07643 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a2Q07643 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Col9a2Q07643 Gm9555-201ENSMUST00000200908 583 ntBASIC13.5□□□□□ -0.25
Col9a2Q07643 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a2Q07643 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.5□□□□□ -0.25
Col9a2Q07643 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.5□□□□□ -0.25
Col9a2Q07643 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.5□□□□□ -0.25
Col9a2Q07643 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a2Q07643 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a2Q07643 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.5□□□□□ -0.25
Col9a2Q07643 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Col9a2Q07643 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a2Q07643 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a2Q07643 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Col9a2Q07643 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.5□□□□□ -0.25
Col9a2Q07643 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a2Q07643 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a2Q07643 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a2Q07643 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Col9a2Q07643 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Col9a2Q07643 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.49□□□□□ -0.25
Col9a2Q07643 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.49□□□□□ -0.25
Col9a2Q07643 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.49□□□□□ -0.25
Col9a2Q07643 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.49□□□□□ -0.25
Col9a2Q07643 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.49□□□□□ -0.25
Col9a2Q07643 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.49□□□□□ -0.25
Col9a2Q07643 Gm15711-201ENSMUST00000118889 535 ntBASIC13.49□□□□□ -0.25
Col9a2Q07643 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 Gm7722-201ENSMUST00000120646 741 ntBASIC13.49□□□□□ -0.25
Col9a2Q07643 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.49□□□□□ -0.25
Col9a2Q07643 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.49□□□□□ -0.25
Col9a2Q07643 Gm5616-201ENSMUST00000165252 384 ntBASIC13.49□□□□□ -0.25
Col9a2Q07643 Gm20426-201ENSMUST00000173657 440 ntBASIC13.49□□□□□ -0.25
Col9a2Q07643 Gm8741-201ENSMUST00000174736 384 ntBASIC13.49□□□□□ -0.25
Col9a2Q07643 Gm44958-201ENSMUST00000203734 736 ntBASIC13.49□□□□□ -0.25
Col9a2Q07643 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.49□□□□□ -0.25
Col9a2Q07643 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.49□□□□□ -0.25
Col9a2Q07643 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.49□□□□□ -0.25
Col9a2Q07643 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Col9a2Q07643 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.49□□□□□ -0.25
Col9a2Q07643 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.49□□□□□ -0.25
Col9a2Q07643 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a2Q07643 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.48□□□□□ -0.25
Col9a2Q07643 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.48□□□□□ -0.25
Col9a2Q07643 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.48□□□□□ -0.25
Col9a2Q07643 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms