Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.54□□□□□ -0.56
Col10a1Q05306 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col10a1Q05306 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Col10a1Q05306 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col10a1Q05306 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Col10a1Q05306 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col10a1Q05306 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col10a1Q05306 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.54□□□□□ -0.56
Col10a1Q05306 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col10a1Q05306 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col10a1Q05306 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col10a1Q05306 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col10a1Q05306 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col10a1Q05306 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col10a1Q05306 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col10a1Q05306 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Col10a1Q05306 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col10a1Q05306 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col10a1Q05306 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col10a1Q05306 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col10a1Q05306 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Col10a1Q05306 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
Col10a1Q05306 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.53□□□□□ -0.56
Col10a1Q05306 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.53□□□□□ -0.56
Col10a1Q05306 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.53□□□□□ -0.56
Col10a1Q05306 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Gm15370-201ENSMUST00000117158 253 ntBASIC11.53□□□□□ -0.56
Col10a1Q05306 Gm11597-201ENSMUST00000121423 964 ntBASIC11.53□□□□□ -0.56
Col10a1Q05306 Gm13786-201ENSMUST00000122371 333 ntBASIC11.53□□□□□ -0.56
Col10a1Q05306 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.53□□□□□ -0.56
Col10a1Q05306 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.53□□□□□ -0.56
Col10a1Q05306 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Col10a1Q05306 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.53□□□□□ -0.56
Col10a1Q05306 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.53□□□□□ -0.56
Col10a1Q05306 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.53□□□□□ -0.56
Col10a1Q05306 Gm27501-201ENSMUST00000183599 107 ntBASIC11.53□□□□□ -0.56
Col10a1Q05306 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Gm37489-201ENSMUST00000191883 159 ntBASIC11.53□□□□□ -0.56
Col10a1Q05306 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.53□□□□□ -0.56
Col10a1Q05306 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.53□□□□□ -0.56
Col10a1Q05306 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Col10a1Q05306 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Col10a1Q05306 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.53□□□□□ -0.56
Col10a1Q05306 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.53□□□□□ -0.56
Col10a1Q05306 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col10a1Q05306 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Col10a1Q05306 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col10a1Q05306 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col10a1Q05306 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
Col10a1Q05306 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col10a1Q05306 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Col10a1Q05306 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.52□□□□□ -0.56
Col10a1Q05306 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col10a1Q05306 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Col10a1Q05306 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col10a1Q05306 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col10a1Q05306 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col10a1Q05306 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.52□□□□□ -0.57
Col10a1Q05306 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col10a1Q05306 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Col10a1Q05306 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Col10a1Q05306 Gm24231-201ENSMUST00000104315 133 ntBASIC11.52□□□□□ -0.57
Col10a1Q05306 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col10a1Q05306 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.52□□□□□ -0.57
Col10a1Q05306 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.52□□□□□ -0.57
Col10a1Q05306 Gm13736-201ENSMUST00000119272 253 ntBASIC11.52□□□□□ -0.57
Col10a1Q05306 Gm13315-201ENSMUST00000120376 991 ntBASIC11.52□□□□□ -0.57
Col10a1Q05306 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col10a1Q05306 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
Col10a1Q05306 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col10a1Q05306 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.52□□□□□ -0.57
Col10a1Q05306 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
Col10a1Q05306 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.52□□□□□ -0.57
Col10a1Q05306 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Col10a1Q05306 Gm27516-201ENSMUST00000184237 98 ntBASIC11.52□□□□□ -0.57
Col10a1Q05306 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms