Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC15.53■□□□□ 0.08
Col1a2Q01149 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col1a2Q01149 Gm44100-201ENSMUST00000204329 436 ntBASIC15.53■□□□□ 0.08
Col1a2Q01149 Gm44711-201ENSMUST00000205414 1264 ntBASIC15.53■□□□□ 0.08
Col1a2Q01149 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Col1a2Q01149 AC098716.1-201ENSMUST00000213527 703 ntBASIC15.53■□□□□ 0.08
Col1a2Q01149 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col1a2Q01149 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col1a2Q01149 Gm10702-201ENSMUST00000098929 1268 ntBASIC15.53■□□□□ 0.08
Col1a2Q01149 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col1a2Q01149 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col1a2Q01149 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col1a2Q01149 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col1a2Q01149 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col1a2Q01149 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col1a2Q01149 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col1a2Q01149 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col1a2Q01149 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col1a2Q01149 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col1a2Q01149 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC15.53■□□□□ 0.08
Col1a2Q01149 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col1a2Q01149 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col1a2Q01149 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col1a2Q01149 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col1a2Q01149 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Col1a2Q01149 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Col1a2Q01149 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Col1a2Q01149 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC15.53■□□□□ 0.08
Col1a2Q01149 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Col1a2Q01149 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Col1a2Q01149 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Col1a2Q01149 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col1a2Q01149 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col1a2Q01149 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col1a2Q01149 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Col1a2Q01149 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col1a2Q01149 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col1a2Q01149 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col1a2Q01149 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Col1a2Q01149 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col1a2Q01149 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col1a2Q01149 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Col1a2Q01149 Gm26286-201ENSMUST00000104166 134 ntBASIC15.52■□□□□ 0.08
Col1a2Q01149 Gm12196-201ENSMUST00000120954 262 ntBASIC15.52■□□□□ 0.08
Col1a2Q01149 Gm22902-201ENSMUST00000158488 302 ntBASIC15.52■□□□□ 0.08
Col1a2Q01149 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC15.52■□□□□ 0.08
Col1a2Q01149 Mir3547-201ENSMUST00000175461 88 ntBASIC15.52■□□□□ 0.08
Col1a2Q01149 Gm8546-201ENSMUST00000178288 1264 ntBASIC15.52■□□□□ 0.08
Col1a2Q01149 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col1a2Q01149 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col1a2Q01149 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC15.52■□□□□ 0.08
Col1a2Q01149 AC133602.1-201ENSMUST00000227510 509 ntBASIC15.52■□□□□ 0.08
Col1a2Q01149 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col1a2Q01149 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col1a2Q01149 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col1a2Q01149 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
Col1a2Q01149 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.52■□□□□ 0.08
Col1a2Q01149 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Col1a2Q01149 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.52■□□□□ 0.08
Col1a2Q01149 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Col1a2Q01149 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col1a2Q01149 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Col1a2Q01149 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col1a2Q01149 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col1a2Q01149 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Col1a2Q01149 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Col1a2Q01149 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.52■□□□□ 0.07
Col1a2Q01149 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col1a2Q01149 Gm43677-201ENSMUST00000198098 2378 ntBASIC15.52■□□□□ 0.07
Col1a2Q01149 Gm37131-201ENSMUST00000192502 1561 ntBASIC15.52■□□□□ 0.07
Col1a2Q01149 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col1a2Q01149 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col1a2Q01149 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col1a2Q01149 AC159195.1-201ENSMUST00000225867 2086 ntBASIC15.51■□□□□ 0.07
Col1a2Q01149 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC15.51■□□□□ 0.07
Col1a2Q01149 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col1a2Q01149 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC15.51■□□□□ 0.07
Col1a2Q01149 Gm23912-201ENSMUST00000104687 87 ntBASIC15.51■□□□□ 0.07
Col1a2Q01149 Gm14058-201ENSMUST00000116082 735 ntBASIC15.51■□□□□ 0.07
Col1a2Q01149 Gm6506-201ENSMUST00000119775 1136 ntBASIC15.51■□□□□ 0.07
Col1a2Q01149 n-R5s14-201ENSMUST00000122688 107 ntBASIC15.51■□□□□ 0.07
Col1a2Q01149 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC15.51■□□□□ 0.07
Col1a2Q01149 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC15.51■□□□□ 0.07
Col1a2Q01149 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC15.51■□□□□ 0.07
Col1a2Q01149 Mir7677-201ENSMUST00000184226 67 ntBASIC15.51■□□□□ 0.07
Col1a2Q01149 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Col1a2Q01149 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col1a2Q01149 Spcs1-203ENSMUST00000226374 592 ntBASIC15.51■□□□□ 0.07
Col1a2Q01149 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Col1a2Q01149 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col1a2Q01149 Gm21811-201ENSMUST00000096485 930 ntBASIC15.51■□□□□ 0.07
Col1a2Q01149 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col1a2Q01149 AC160405.1-201ENSMUST00000218207 1545 ntBASIC15.51■□□□□ 0.07
Col1a2Q01149 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col1a2Q01149 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.51■□□□□ 0.07
Col1a2Q01149 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
Col1a2Q01149 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col1a2Q01149 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col1a2Q01149 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Col1a2Q01149 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms