Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb1P70662 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.43□□□□□ -0.42
Ldb1P70662 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb1P70662 Gm9022-201ENSMUST00000182482 992 ntBASIC12.43□□□□□ -0.42
Ldb1P70662 Gm27514-201ENSMUST00000183692 110 ntBASIC12.43□□□□□ -0.42
Ldb1P70662 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb1P70662 Gm5904-201ENSMUST00000210286 865 ntBASIC12.43□□□□□ -0.42
Ldb1P70662 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.43□□□□□ -0.42
Ldb1P70662 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.43□□□□□ -0.42
Ldb1P70662 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb1P70662 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb1P70662 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb1P70662 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb1P70662 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ldb1P70662 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.43□□□□□ -0.42
Ldb1P70662 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb1P70662 Cog3-203ENSMUST00000227473 4197 ntBASIC12.43□□□□□ -0.42
Ldb1P70662 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb1P70662 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb1P70662 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb1P70662 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb1P70662 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb1P70662 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb1P70662 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.42□□□□□ -0.42
Ldb1P70662 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ldb1P70662 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb1P70662 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb1P70662 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb1P70662 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb1P70662 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb1P70662 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb1P70662 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.42□□□□□ -0.42
Ldb1P70662 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb1P70662 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.42□□□□□ -0.42
Ldb1P70662 Gm5370-201ENSMUST00000187187 574 ntBASIC12.42□□□□□ -0.42
Ldb1P70662 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.42□□□□□ -0.42
Ldb1P70662 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.42□□□□□ -0.42
Ldb1P70662 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb1P70662 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb1P70662 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.42□□□□□ -0.42
Ldb1P70662 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb1P70662 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ldb1P70662 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.42□□□□□ -0.42
Ldb1P70662 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb1P70662 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb1P70662 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.42□□□□□ -0.42
Ldb1P70662 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb1P70662 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb1P70662 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.41□□□□□ -0.42
Ldb1P70662 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ldb1P70662 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb1P70662 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.41□□□□□ -0.42
Ldb1P70662 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb1P70662 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb1P70662 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Ldb1P70662 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb1P70662 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb1P70662 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb1P70662 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ldb1P70662 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb1P70662 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.41□□□□□ -0.42
Ldb1P70662 Gm13315-201ENSMUST00000120376 991 ntBASIC12.41□□□□□ -0.42
Ldb1P70662 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb1P70662 Gm16379-201ENSMUST00000161469 348 ntBASIC12.41□□□□□ -0.42
Ldb1P70662 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.41□□□□□ -0.42
Ldb1P70662 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.41□□□□□ -0.42
Ldb1P70662 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.41□□□□□ -0.42
Ldb1P70662 Gm8762-201ENSMUST00000193486 339 ntBASIC12.41□□□□□ -0.42
Ldb1P70662 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.41□□□□□ -0.42
Ldb1P70662 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.41□□□□□ -0.42
Ldb1P70662 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb1P70662 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb1P70662 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb1P70662 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb1P70662 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb1P70662 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb1P70662 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb1P70662 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ldb1P70662 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb1P70662 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Ldb1P70662 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb1P70662 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb1P70662 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.41□□□□□ -0.42
Ldb1P70662 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb1P70662 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.41□□□□□ -0.42
Ldb1P70662 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb1P70662 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.4□□□□□ -0.42
Ldb1P70662 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ldb1P70662 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ldb1P70662 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Ldb1P70662 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms