Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msx3P70354 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.83□□□□□ -0.36
Msx3P70354 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Msx3P70354 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Msx3P70354 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Msx3P70354 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Msx3P70354 Gm8738-201ENSMUST00000172606 329 ntBASIC12.83□□□□□ -0.36
Msx3P70354 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.83□□□□□ -0.36
Msx3P70354 Gm3890-201ENSMUST00000182416 207 ntBASIC12.83□□□□□ -0.36
Msx3P70354 Gm9022-201ENSMUST00000182482 992 ntBASIC12.83□□□□□ -0.36
Msx3P70354 Gm7063-201ENSMUST00000186840 981 ntBASIC12.83□□□□□ -0.36
Msx3P70354 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.83□□□□□ -0.36
Msx3P70354 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.83□□□□□ -0.36
Msx3P70354 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.83□□□□□ -0.36
Msx3P70354 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msx3P70354 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Msx3P70354 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Msx3P70354 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.83□□□□□ -0.36
Msx3P70354 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.83□□□□□ -0.36
Msx3P70354 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msx3P70354 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msx3P70354 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msx3P70354 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Msx3P70354 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msx3P70354 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msx3P70354 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msx3P70354 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.83□□□□□ -0.36
Msx3P70354 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.83□□□□□ -0.36
Msx3P70354 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Msx3P70354 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Msx3P70354 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msx3P70354 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.82□□□□□ -0.36
Msx3P70354 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.82□□□□□ -0.36
Msx3P70354 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.82□□□□□ -0.36
Msx3P70354 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Msx3P70354 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Msx3P70354 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 Gm12314-201ENSMUST00000118104 538 ntBASIC12.82□□□□□ -0.36
Msx3P70354 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.82□□□□□ -0.36
Msx3P70354 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.82□□□□□ -0.36
Msx3P70354 Gm7809-201ENSMUST00000153199 742 ntBASIC12.82□□□□□ -0.36
Msx3P70354 Gm24548-201ENSMUST00000158650 108 ntBASIC12.82□□□□□ -0.36
Msx3P70354 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.82□□□□□ -0.36
Msx3P70354 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 Gm45784-201ENSMUST00000188360 142 ntBASIC12.82□□□□□ -0.36
Msx3P70354 Gm44882-201ENSMUST00000205702 802 ntBASIC12.82□□□□□ -0.36
Msx3P70354 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.82□□□□□ -0.36
Msx3P70354 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.82□□□□□ -0.36
Msx3P70354 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Msx3P70354 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.82□□□□□ -0.36
Msx3P70354 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.82□□□□□ -0.36
Msx3P70354 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Msx3P70354 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx3P70354 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.82□□□□□ -0.36
Msx3P70354 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.81□□□□□ -0.36
Msx3P70354 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msx3P70354 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx3P70354 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx3P70354 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx3P70354 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx3P70354 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx3P70354 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Msx3P70354 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Msx3P70354 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Msx3P70354 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.81□□□□□ -0.36
Msx3P70354 Gm23119-201ENSMUST00000158610 140 ntBASIC12.81□□□□□ -0.36
Msx3P70354 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.81□□□□□ -0.36
Msx3P70354 Gm6222-202ENSMUST00000182143 629 ntBASIC12.81□□□□□ -0.36
Msx3P70354 Gm27731-201ENSMUST00000185192 107 ntBASIC12.81□□□□□ -0.36
Msx3P70354 Gm44405-201ENSMUST00000198952 126 ntBASIC12.81□□□□□ -0.36
Msx3P70354 Gm42599-201ENSMUST00000201308 469 ntBASIC12.81□□□□□ -0.36
Msx3P70354 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.81□□□□□ -0.36
Msx3P70354 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.81□□□□□ -0.36
Msx3P70354 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx3P70354 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx3P70354 Snora73a-201ENSMUST00000082453 205 ntBASIC12.81□□□□□ -0.36
Msx3P70354 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx3P70354 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msx3P70354 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms