Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.78□□□□□ -0.2
Hmgb1P63158 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Matn2-203ENSMUST00000226766 3252 ntBASIC13.78□□□□□ -0.2
Hmgb1P63158 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Hmgb1P63158 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hmgb1P63158 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hmgb1P63158 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hmgb1P63158 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Hmgb1P63158 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
Hmgb1P63158 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hmgb1P63158 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hmgb1P63158 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hmgb1P63158 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Hmgb1P63158 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Hmgb1P63158 Gm13492-201ENSMUST00000119772 665 ntBASIC13.77□□□□□ -0.21
Hmgb1P63158 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Hmgb1P63158 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Hmgb1P63158 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.77□□□□□ -0.21
Hmgb1P63158 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hmgb1P63158 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.77□□□□□ -0.21
Hmgb1P63158 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hmgb1P63158 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hmgb1P63158 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hmgb1P63158 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hmgb1P63158 Rmrp-201ENSMUST00000157463 271 ntBASIC13.77□□□□□ -0.21
Hmgb1P63158 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.77□□□□□ -0.21
Hmgb1P63158 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Hmgb1P63158 Gm7029-201ENSMUST00000173226 450 ntBASIC13.77□□□□□ -0.21
Hmgb1P63158 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hmgb1P63158 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.77□□□□□ -0.21
Hmgb1P63158 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmgb1P63158 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.77□□□□□ -0.21
Hmgb1P63158 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmgb1P63158 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmgb1P63158 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Hmgb1P63158 Gm6091-201ENSMUST00000098307 165 ntBASIC13.77□□□□□ -0.21
Hmgb1P63158 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmgb1P63158 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmgb1P63158 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Hmgb1P63158 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmgb1P63158 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.76□□□□□ -0.21
Hmgb1P63158 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.76□□□□□ -0.21
Hmgb1P63158 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Hmgb1P63158 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Hmgb1P63158 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Hmgb1P63158 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Gm27839-201ENSMUST00000184242 106 ntBASIC13.76□□□□□ -0.21
Hmgb1P63158 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.76□□□□□ -0.21
Hmgb1P63158 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Hmgb1P63158 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Hmgb1P63158 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Hmgb1P63158 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.76□□□□□ -0.21
Hmgb1P63158 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.76□□□□□ -0.21
Hmgb1P63158 Daam2-202ENSMUST00000224595 1926 ntBASIC13.76□□□□□ -0.21
Hmgb1P63158 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Hmgb1P63158 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgb1P63158 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms