Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Lsm6P62313 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.98□□□□□ -0.65
Lsm6P62313 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Lsm6P62313 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.98□□□□□ -0.65
Lsm6P62313 Gm7809-201ENSMUST00000153199 742 ntBASIC10.98□□□□□ -0.65
Lsm6P62313 Gm25261-201ENSMUST00000157416 134 ntBASIC10.98□□□□□ -0.65
Lsm6P62313 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.98□□□□□ -0.65
Lsm6P62313 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Gm8738-201ENSMUST00000172606 329 ntBASIC10.98□□□□□ -0.65
Lsm6P62313 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.98□□□□□ -0.65
Lsm6P62313 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Lsm6P62313 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.98□□□□□ -0.65
Lsm6P62313 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Gm45925-201ENSMUST00000218882 744 ntBASIC10.98□□□□□ -0.65
Lsm6P62313 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.98□□□□□ -0.65
Lsm6P62313 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Lsm6P62313 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Lsm6P62313 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.98□□□□□ -0.65
Lsm6P62313 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Lsm6P62313 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm6P62313 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.97□□□□□ -0.65
Lsm6P62313 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.97□□□□□ -0.65
Lsm6P62313 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Lsm6P62313 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Lsm6P62313 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 Gm13829-201ENSMUST00000119600 138 ntBASIC10.97□□□□□ -0.65
Lsm6P62313 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 Gm24548-201ENSMUST00000158650 108 ntBASIC10.97□□□□□ -0.65
Lsm6P62313 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 Gm6222-202ENSMUST00000182143 629 ntBASIC10.97□□□□□ -0.65
Lsm6P62313 Gm3890-201ENSMUST00000182416 207 ntBASIC10.97□□□□□ -0.65
Lsm6P62313 Gm44405-201ENSMUST00000198952 126 ntBASIC10.97□□□□□ -0.65
Lsm6P62313 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.97□□□□□ -0.65
Lsm6P62313 Gm22058-201ENSMUST00000083393 310 ntBASIC10.97□□□□□ -0.65
Lsm6P62313 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Lsm6P62313 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Lsm6P62313 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.97□□□□□ -0.65
Lsm6P62313 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.97□□□□□ -0.65
Lsm6P62313 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.97□□□□□ -0.65
Lsm6P62313 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm6P62313 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm6P62313 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
Lsm6P62313 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm6P62313 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm6P62313 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm6P62313 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm6P62313 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.96□□□□□ -0.65
Lsm6P62313 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm6P62313 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm6P62313 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.96□□□□□ -0.65
Lsm6P62313 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms