Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Lrch1P62046 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Lrch1P62046 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrch1P62046 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrch1P62046 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrch1P62046 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Lrch1P62046 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrch1P62046 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrch1P62046 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Lrch1P62046 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lrch1P62046 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.69□□□□□ -0.06
Lrch1P62046 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Lrch1P62046 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.69□□□□□ -0.06
Lrch1P62046 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrch1P62046 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrch1P62046 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC14.69□□□□□ -0.06
Lrch1P62046 Gm12816-201ENSMUST00000118069 1212 ntBASIC14.69□□□□□ -0.06
Lrch1P62046 Gm4879-201ENSMUST00000122190 1272 ntBASIC14.69□□□□□ -0.06
Lrch1P62046 Gm12628-201ENSMUST00000122193 382 ntBASIC14.69□□□□□ -0.06
Lrch1P62046 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Lrch1P62046 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC14.69□□□□□ -0.06
Lrch1P62046 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC14.69□□□□□ -0.06
Lrch1P62046 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Lrch1P62046 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrch1P62046 Gm44958-201ENSMUST00000203734 736 ntBASIC14.69□□□□□ -0.06
Lrch1P62046 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC14.69□□□□□ -0.06
Lrch1P62046 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrch1P62046 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.69□□□□□ -0.06
Lrch1P62046 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrch1P62046 Gm5879-201ENSMUST00000089501 1209 ntBASIC14.69□□□□□ -0.06
Lrch1P62046 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrch1P62046 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Lrch1P62046 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.69□□□□□ -0.06
Lrch1P62046 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrch1P62046 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrch1P62046 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrch1P62046 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrch1P62046 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrch1P62046 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Lrch1P62046 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Lrch1P62046 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.68□□□□□ -0.06
Lrch1P62046 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Lrch1P62046 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Lrch1P62046 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Lrch1P62046 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Lrch1P62046 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
Lrch1P62046 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Lrch1P62046 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC14.68□□□□□ -0.06
Lrch1P62046 Gm1848-201ENSMUST00000120711 789 ntBASIC14.68□□□□□ -0.06
Lrch1P62046 Gm23119-201ENSMUST00000158610 140 ntBASIC14.68□□□□□ -0.06
Lrch1P62046 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC14.68□□□□□ -0.06
Lrch1P62046 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC14.68□□□□□ -0.06
Lrch1P62046 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Lrch1P62046 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lrch1P62046 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.68□□□□□ -0.06
Lrch1P62046 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lrch1P62046 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lrch1P62046 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lrch1P62046 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lrch1P62046 Gm3765-201ENSMUST00000130985 1447 ntBASIC14.67□□□□□ -0.06
Lrch1P62046 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lrch1P62046 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lrch1P62046 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lrch1P62046 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Lrch1P62046 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Lrch1P62046 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lrch1P62046 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.67□□□□□ -0.06
Lrch1P62046 Gm26286-201ENSMUST00000104166 134 ntBASIC14.67□□□□□ -0.06
Lrch1P62046 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lrch1P62046 Mir1956-201ENSMUST00000157748 65 ntBASIC14.67□□□□□ -0.06
Lrch1P62046 Gm43520-201ENSMUST00000197996 164 ntBASIC14.67□□□□□ -0.06
Lrch1P62046 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.67□□□□□ -0.06
Lrch1P62046 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lrch1P62046 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Lrch1P62046 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Lrch1P62046 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lrch1P62046 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lrch1P62046 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms