Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CckbrP56481 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CckbrP56481 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CckbrP56481 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CckbrP56481 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CckbrP56481 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CckbrP56481 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.6□□□□□ -0.55
CckbrP56481 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.6□□□□□ -0.55
CckbrP56481 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CckbrP56481 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CckbrP56481 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CckbrP56481 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CckbrP56481 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CckbrP56481 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CckbrP56481 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CckbrP56481 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
CckbrP56481 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.6□□□□□ -0.55
CckbrP56481 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CckbrP56481 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.59□□□□□ -0.55
CckbrP56481 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
CckbrP56481 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
CckbrP56481 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.59□□□□□ -0.55
CckbrP56481 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.59□□□□□ -0.55
CckbrP56481 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.59□□□□□ -0.55
CckbrP56481 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.59□□□□□ -0.55
CckbrP56481 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CckbrP56481 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.59□□□□□ -0.55
CckbrP56481 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.59□□□□□ -0.55
CckbrP56481 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CckbrP56481 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
CckbrP56481 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.59□□□□□ -0.55
CckbrP56481 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.59□□□□□ -0.55
CckbrP56481 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.59□□□□□ -0.55
CckbrP56481 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.59□□□□□ -0.55
CckbrP56481 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
CckbrP56481 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CckbrP56481 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.59□□□□□ -0.55
CckbrP56481 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CckbrP56481 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
CckbrP56481 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
CckbrP56481 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CckbrP56481 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
CckbrP56481 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.58□□□□□ -0.56
CckbrP56481 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
CckbrP56481 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.58□□□□□ -0.56
CckbrP56481 Gm13786-201ENSMUST00000122371 333 ntBASIC11.58□□□□□ -0.56
CckbrP56481 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.58□□□□□ -0.56
CckbrP56481 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.58□□□□□ -0.56
CckbrP56481 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
CckbrP56481 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
CckbrP56481 Gm42693-201ENSMUST00000196779 631 ntBASIC11.58□□□□□ -0.56
CckbrP56481 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.58□□□□□ -0.56
CckbrP56481 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.58□□□□□ -0.56
CckbrP56481 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Gm9899-201ENSMUST00000065519 555 ntBASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms