Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.31□□□□□ -0.28
NrlP54846 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.31□□□□□ -0.28
NrlP54846 Gm27552-201ENSMUST00000183351 62 ntBASIC13.31□□□□□ -0.28
NrlP54846 Gm27844-201ENSMUST00000183613 62 ntBASIC13.31□□□□□ -0.28
NrlP54846 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.31□□□□□ -0.28
NrlP54846 Gm7003-201ENSMUST00000195089 312 ntBASIC13.31□□□□□ -0.28
NrlP54846 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NrlP54846 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NrlP54846 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NrlP54846 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NrlP54846 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
NrlP54846 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NrlP54846 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.31□□□□□ -0.28
NrlP54846 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NrlP54846 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NrlP54846 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
NrlP54846 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NrlP54846 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NrlP54846 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.31□□□□□ -0.28
NrlP54846 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NrlP54846 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NrlP54846 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NrlP54846 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NrlP54846 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.31□□□□□ -0.28
NrlP54846 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.31□□□□□ -0.28
NrlP54846 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
NrlP54846 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
NrlP54846 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
NrlP54846 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Gm12266-201ENSMUST00000120311 962 ntBASIC13.3□□□□□ -0.28
NrlP54846 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.3□□□□□ -0.28
NrlP54846 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.3□□□□□ -0.28
NrlP54846 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.3□□□□□ -0.28
NrlP54846 Gm20426-201ENSMUST00000173657 440 ntBASIC13.3□□□□□ -0.28
NrlP54846 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.3□□□□□ -0.28
NrlP54846 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.3□□□□□ -0.28
NrlP54846 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.3□□□□□ -0.28
NrlP54846 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.3□□□□□ -0.28
NrlP54846 Gm29787-201ENSMUST00000222129 849 ntBASIC13.3□□□□□ -0.28
NrlP54846 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
NrlP54846 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
NrlP54846 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.3□□□□□ -0.28
NrlP54846 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
NrlP54846 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NrlP54846 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NrlP54846 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
NrlP54846 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NrlP54846 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.29□□□□□ -0.28
NrlP54846 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NrlP54846 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NrlP54846 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NrlP54846 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.29□□□□□ -0.28
NrlP54846 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
NrlP54846 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
NrlP54846 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NrlP54846 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NrlP54846 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NrlP54846 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NrlP54846 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
NrlP54846 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NrlP54846 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NrlP54846 Gm17040-202ENSMUST00000170597 889 ntBASIC13.29□□□□□ -0.28
NrlP54846 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.29□□□□□ -0.28
NrlP54846 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
NrlP54846 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NrlP54846 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NrlP54846 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.29□□□□□ -0.28
NrlP54846 Gm18730-201ENSMUST00000218038 343 ntBASIC13.29□□□□□ -0.28
NrlP54846 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NrlP54846 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NrlP54846 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.29□□□□□ -0.28
NrlP54846 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NrlP54846 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.29□□□□□ -0.28
NrlP54846 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.29□□□□□ -0.28
NrlP54846 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
NrlP54846 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NrlP54846 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms