Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh6P54276 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh6P54276 Gm22133-201ENSMUST00000102082 109 ntBASIC15.74■□□□□ 0.11
Msh6P54276 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Msh6P54276 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC15.74■□□□□ 0.11
Msh6P54276 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Msh6P54276 Gm4993-201ENSMUST00000118719 1174 ntBASIC15.74■□□□□ 0.11
Msh6P54276 Gm12029-201ENSMUST00000120073 832 ntBASIC15.74■□□□□ 0.11
Msh6P54276 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC15.74■□□□□ 0.11
Msh6P54276 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC15.74■□□□□ 0.11
Msh6P54276 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh6P54276 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh6P54276 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh6P54276 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Msh6P54276 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh6P54276 AC123619.2-202ENSMUST00000225097 1568 ntBASIC15.73■□□□□ 0.11
Msh6P54276 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Msh6P54276 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh6P54276 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Msh6P54276 Gm5525-201ENSMUST00000190438 1312 ntBASIC15.73■□□□□ 0.11
Msh6P54276 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Msh6P54276 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Msh6P54276 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh6P54276 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Msh6P54276 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh6P54276 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh6P54276 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Msh6P54276 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Msh6P54276 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh6P54276 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh6P54276 Gm11989-201ENSMUST00000117240 672 ntBASIC15.73■□□□□ 0.11
Msh6P54276 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC15.73■□□□□ 0.11
Msh6P54276 Gm11362-201ENSMUST00000118838 850 ntBASIC15.73■□□□□ 0.11
Msh6P54276 Gm12501-201ENSMUST00000119163 529 ntBASIC15.73■□□□□ 0.11
Msh6P54276 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Msh6P54276 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Msh6P54276 Gm8365-201ENSMUST00000197334 648 ntBASIC15.73■□□□□ 0.11
Msh6P54276 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Msh6P54276 Gm17827-201ENSMUST00000211825 742 ntBASIC15.73■□□□□ 0.11
Msh6P54276 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC15.73■□□□□ 0.11
Msh6P54276 AC159103.1-201ENSMUST00000228325 429 ntBASIC15.73■□□□□ 0.11
Msh6P54276 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Msh6P54276 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Msh6P54276 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC15.73■□□□□ 0.11
Msh6P54276 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh6P54276 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC15.73■□□□□ 0.11
Msh6P54276 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Msh6P54276 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh6P54276 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh6P54276 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.73■□□□□ 0.11
Msh6P54276 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh6P54276 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Msh6P54276 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh6P54276 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC15.72■□□□□ 0.11
Msh6P54276 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Msh6P54276 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh6P54276 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh6P54276 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC15.72■□□□□ 0.11
Msh6P54276 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh6P54276 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh6P54276 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh6P54276 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh6P54276 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Msh6P54276 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Msh6P54276 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh6P54276 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Msh6P54276 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh6P54276 Gm12196-201ENSMUST00000120954 262 ntBASIC15.72■□□□□ 0.11
Msh6P54276 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC15.72■□□□□ 0.11
Msh6P54276 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Msh6P54276 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Msh6P54276 Gm7600-201ENSMUST00000209657 785 ntBASIC15.72■□□□□ 0.11
Msh6P54276 Olfr1347-205ENSMUST00000220413 964 ntBASIC15.72■□□□□ 0.11
Msh6P54276 Gm1821-202ENSMUST00000227415 750 ntBASIC15.72■□□□□ 0.11
Msh6P54276 AC133602.1-201ENSMUST00000227510 509 ntBASIC15.72■□□□□ 0.11
Msh6P54276 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Msh6P54276 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Msh6P54276 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Msh6P54276 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh6P54276 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh6P54276 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh6P54276 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Msh6P54276 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh6P54276 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Msh6P54276 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC15.71■□□□□ 0.11
Msh6P54276 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Msh6P54276 Gm4735-201ENSMUST00000138679 1302 ntBASIC15.71■□□□□ 0.11
Msh6P54276 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 Gm5855-201ENSMUST00000200240 1305 ntBASIC15.71■□□□□ 0.11
Msh6P54276 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 Gm2420-201ENSMUST00000119864 2149 ntBASIC15.71■□□□□ 0.11
Msh6P54276 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms