Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fdft1P53798 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Fdft1P53798 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.5□□□□□ -0.41
Fdft1P53798 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fdft1P53798 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Fdft1P53798 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Fdft1P53798 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Fdft1P53798 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fdft1P53798 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fdft1P53798 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fdft1P53798 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fdft1P53798 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Fdft1P53798 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Fdft1P53798 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.49□□□□□ -0.41
Fdft1P53798 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.49□□□□□ -0.41
Fdft1P53798 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Fdft1P53798 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Fdft1P53798 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Fdft1P53798 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.49□□□□□ -0.41
Fdft1P53798 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.49□□□□□ -0.41
Fdft1P53798 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Fdft1P53798 Gm43818-201ENSMUST00000200605 466 ntBASIC12.49□□□□□ -0.41
Fdft1P53798 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.49□□□□□ -0.41
Fdft1P53798 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Fdft1P53798 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Fdft1P53798 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fdft1P53798 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Fdft1P53798 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fdft1P53798 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Fdft1P53798 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Fdft1P53798 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Fdft1P53798 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fdft1P53798 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.48□□□□□ -0.41
Fdft1P53798 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fdft1P53798 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fdft1P53798 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Fdft1P53798 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Fdft1P53798 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fdft1P53798 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fdft1P53798 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fdft1P53798 Gm1335-201ENSMUST00000121653 386 ntBASIC12.48□□□□□ -0.41
Fdft1P53798 Gm17150-201ENSMUST00000165577 381 ntBASIC12.48□□□□□ -0.41
Fdft1P53798 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Fdft1P53798 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fdft1P53798 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.48□□□□□ -0.41
Fdft1P53798 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.48□□□□□ -0.41
Fdft1P53798 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.48□□□□□ -0.41
Fdft1P53798 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.48□□□□□ -0.41
Fdft1P53798 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Fdft1P53798 Gm40466-201ENSMUST00000212174 422 ntBASIC12.48□□□□□ -0.41
Fdft1P53798 Gm32025-201ENSMUST00000217960 307 ntBASIC12.48□□□□□ -0.41
Fdft1P53798 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.48□□□□□ -0.41
Fdft1P53798 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fdft1P53798 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fdft1P53798 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Fdft1P53798 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fdft1P53798 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Fdft1P53798 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fdft1P53798 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fdft1P53798 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fdft1P53798 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.48□□□□□ -0.41
Fdft1P53798 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fdft1P53798 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.48□□□□□ -0.41
Fdft1P53798 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Fdft1P53798 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Fdft1P53798 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.48□□□□□ -0.41
Fdft1P53798 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fdft1P53798 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Fdft1P53798 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.47□□□□□ -0.41
Fdft1P53798 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms