Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Sox1P53783 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sox1P53783 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sox1P53783 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox1P53783 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox1P53783 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox1P53783 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sox1P53783 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sox1P53783 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.74□□□□□ -0.37
Sox1P53783 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sox1P53783 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.74□□□□□ -0.37
Sox1P53783 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Sox1P53783 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sox1P53783 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Gm8737-201ENSMUST00000122208 642 ntBASIC12.74□□□□□ -0.37
Sox1P53783 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.74□□□□□ -0.37
Sox1P53783 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Gm44647-201ENSMUST00000207402 428 ntBASIC12.74□□□□□ -0.37
Sox1P53783 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sox1P53783 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.74□□□□□ -0.37
Sox1P53783 Gm5455-201ENSMUST00000058710 715 ntBASIC12.74□□□□□ -0.37
Sox1P53783 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Gm5805-201ENSMUST00000072779 456 ntBASIC12.74□□□□□ -0.37
Sox1P53783 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.74□□□□□ -0.37
Sox1P53783 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sox1P53783 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox1P53783 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.74□□□□□ -0.37
Sox1P53783 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox1P53783 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sox1P53783 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sox1P53783 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
Sox1P53783 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sox1P53783 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox1P53783 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox1P53783 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox1P53783 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox1P53783 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox1P53783 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox1P53783 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sox1P53783 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox1P53783 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sox1P53783 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox1P53783 Mir744-201ENSMUST00000103261 100 ntBASIC12.73□□□□□ -0.37
Sox1P53783 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.73□□□□□ -0.37
Sox1P53783 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.73□□□□□ -0.37
Sox1P53783 Gm12314-201ENSMUST00000118104 538 ntBASIC12.73□□□□□ -0.37
Sox1P53783 Gm15003-201ENSMUST00000118884 446 ntBASIC12.73□□□□□ -0.37
Sox1P53783 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox1P53783 Gm12453-201ENSMUST00000121981 331 ntBASIC12.73□□□□□ -0.37
Sox1P53783 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox1P53783 Gm20414-201ENSMUST00000172918 646 ntBASIC12.73□□□□□ -0.37
Sox1P53783 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Sox1P53783 Gm43930-201ENSMUST00000203868 845 ntBASIC12.73□□□□□ -0.37
Sox1P53783 Gm29763-201ENSMUST00000205306 616 ntBASIC12.73□□□□□ -0.37
Sox1P53783 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC12.73□□□□□ -0.37
Sox1P53783 Gm45135-201ENSMUST00000206787 1184 ntBASIC12.73□□□□□ -0.37
Sox1P53783 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC12.73□□□□□ -0.37
Sox1P53783 AC164087.2-201ENSMUST00000216206 1072 ntBASIC12.73□□□□□ -0.37
Sox1P53783 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.73□□□□□ -0.37
Sox1P53783 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.73□□□□□ -0.37
Sox1P53783 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Sox1P53783 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Sox1P53783 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox1P53783 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.73□□□□□ -0.37
Sox1P53783 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox1P53783 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Sox1P53783 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox1P53783 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox1P53783 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Sox1P53783 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox1P53783 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.73□□□□□ -0.37
Sox1P53783 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox1P53783 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox1P53783 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox1P53783 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox1P53783 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox1P53783 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.72□□□□□ -0.37
Sox1P53783 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sox1P53783 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms