Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox2P48432 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.69□□□□□ -0.54
Sox2P48432 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Sox2P48432 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox2P48432 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Sox2P48432 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sox2P48432 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sox2P48432 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.68□□□□□ -0.54
Sox2P48432 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.68□□□□□ -0.54
Sox2P48432 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.68□□□□□ -0.54
Sox2P48432 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Sox2P48432 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox2P48432 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.68□□□□□ -0.54
Sox2P48432 Gm44855-201ENSMUST00000205725 362 ntBASIC11.68□□□□□ -0.54
Sox2P48432 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.68□□□□□ -0.54
Sox2P48432 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
Sox2P48432 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sox2P48432 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sox2P48432 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox2P48432 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox2P48432 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sox2P48432 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox2P48432 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.68□□□□□ -0.54
Sox2P48432 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Sox2P48432 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox2P48432 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox2P48432 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Sox2P48432 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.67□□□□□ -0.54
Sox2P48432 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sox2P48432 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Sox2P48432 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox2P48432 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.67□□□□□ -0.54
Sox2P48432 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Sox2P48432 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Gm8805-201ENSMUST00000117848 313 ntBASIC11.67□□□□□ -0.54
Sox2P48432 Gm11618-201ENSMUST00000117946 267 ntBASIC11.67□□□□□ -0.54
Sox2P48432 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Sox2P48432 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.67□□□□□ -0.54
Sox2P48432 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox2P48432 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox2P48432 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.67□□□□□ -0.54
Sox2P48432 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox2P48432 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.67□□□□□ -0.54
Sox2P48432 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms