Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Fen1P39749 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fen1P39749 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Fen1P39749 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Fen1P39749 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fen1P39749 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Fen1P39749 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Fen1P39749 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fen1P39749 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fen1P39749 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fen1P39749 Daam2-202ENSMUST00000224595 1926 ntBASIC12.58□□□□□ -0.4
Fen1P39749 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Fen1P39749 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.58□□□□□ -0.4
Fen1P39749 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Fen1P39749 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fen1P39749 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Fen1P39749 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fen1P39749 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Fen1P39749 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Fen1P39749 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Fen1P39749 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fen1P39749 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fen1P39749 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.57□□□□□ -0.4
Fen1P39749 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fen1P39749 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fen1P39749 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.57□□□□□ -0.4
Fen1P39749 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fen1P39749 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Fen1P39749 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fen1P39749 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fen1P39749 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.57□□□□□ -0.4
Fen1P39749 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fen1P39749 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Fen1P39749 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.57□□□□□ -0.4
Fen1P39749 Gm43438-201ENSMUST00000198133 379 ntBASIC12.57□□□□□ -0.4
Fen1P39749 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.57□□□□□ -0.4
Fen1P39749 Gm44124-201ENSMUST00000204159 472 ntBASIC12.57□□□□□ -0.4
Fen1P39749 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.57□□□□□ -0.4
Fen1P39749 Itm2b-204ENSMUST00000228637 783 ntBASIC12.57□□□□□ -0.4
Fen1P39749 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fen1P39749 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fen1P39749 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fen1P39749 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fen1P39749 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fen1P39749 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.57□□□□□ -0.4
Fen1P39749 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fen1P39749 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fen1P39749 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Fen1P39749 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fen1P39749 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Fen1P39749 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fen1P39749 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fen1P39749 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fen1P39749 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fen1P39749 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fen1P39749 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.57□□□□□ -0.4
Fen1P39749 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Fen1P39749 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Fen1P39749 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.56□□□□□ -0.4
Fen1P39749 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 Gm11478-201ENSMUST00000117851 599 ntBASIC12.56□□□□□ -0.4
Fen1P39749 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.56□□□□□ -0.4
Fen1P39749 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.56□□□□□ -0.4
Fen1P39749 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Fen1P39749 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.56□□□□□ -0.4
Fen1P39749 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.56□□□□□ -0.4
Fen1P39749 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.56□□□□□ -0.4
Fen1P39749 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.56□□□□□ -0.4
Fen1P39749 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Fen1P39749 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Fen1P39749 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Fen1P39749 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.56□□□□□ -0.4
Fen1P39749 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Fen1P39749 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Fen1P39749 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fen1P39749 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Fen1P39749 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.55□□□□□ -0.4
Fen1P39749 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms