Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.06□□□□□ -0.48
Fv4P11370 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Fv4P11370 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.06□□□□□ -0.48
Fv4P11370 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Fv4P11370 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Fv4P11370 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Fv4P11370 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.05□□□□□ -0.48
Fv4P11370 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Fv4P11370 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.05□□□□□ -0.48
Fv4P11370 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Fv4P11370 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.05□□□□□ -0.48
Fv4P11370 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Fv4P11370 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Fv4P11370 Gm11478-201ENSMUST00000117851 599 ntBASIC12.05□□□□□ -0.48
Fv4P11370 Gm11597-201ENSMUST00000121423 964 ntBASIC12.05□□□□□ -0.48
Fv4P11370 Gm1335-201ENSMUST00000121653 386 ntBASIC12.05□□□□□ -0.48
Fv4P11370 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.05□□□□□ -0.48
Fv4P11370 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Gm44882-201ENSMUST00000205702 802 ntBASIC12.05□□□□□ -0.48
Fv4P11370 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Fv4P11370 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Fv4P11370 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.05□□□□□ -0.48
Fv4P11370 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Fv4P11370 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Fv4P11370 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Fv4P11370 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.05□□□□□ -0.48
Fv4P11370 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.05□□□□□ -0.48
Fv4P11370 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Fv4P11370 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Fv4P11370 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.05□□□□□ -0.48
Fv4P11370 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Fv4P11370 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Fv4P11370 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Fv4P11370 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fv4P11370 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Fv4P11370 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fv4P11370 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fv4P11370 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Fv4P11370 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Fv4P11370 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fv4P11370 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Fv4P11370 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.04□□□□□ -0.48
Fv4P11370 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.04□□□□□ -0.48
Fv4P11370 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Fv4P11370 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fv4P11370 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.04□□□□□ -0.48
Fv4P11370 Gm13315-201ENSMUST00000120376 991 ntBASIC12.04□□□□□ -0.48
Fv4P11370 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.04□□□□□ -0.48
Fv4P11370 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.04□□□□□ -0.48
Fv4P11370 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Fv4P11370 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Fv4P11370 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.04□□□□□ -0.48
Fv4P11370 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Fv4P11370 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fv4P11370 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fv4P11370 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms