Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ly6c1P0CW02 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ly6c1P0CW02 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.58□□□□□ -0.72
Ly6c1P0CW02 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ly6c1P0CW02 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ly6c1P0CW02 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ly6c1P0CW02 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ly6c1P0CW02 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ly6c1P0CW02 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ly6c1P0CW02 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Ly6c1P0CW02 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ly6c1P0CW02 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ly6c1P0CW02 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ly6c1P0CW02 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ly6c1P0CW02 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Gm12241-201ENSMUST00000118330 726 ntBASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Gm14723-201ENSMUST00000118686 215 ntBASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Gm8988-201ENSMUST00000155015 1240 ntBASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Gm2991-201ENSMUST00000173338 480 ntBASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Gm6621-201ENSMUST00000193251 772 ntBASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Gm45399-201ENSMUST00000209955 1016 ntBASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Gm45525-201ENSMUST00000210800 389 ntBASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Morn2-202ENSMUST00000227729 656 ntBASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ly6c1P0CW02 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ly6c1P0CW02 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.56□□□□□ -0.72
Ly6c1P0CW02 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ly6c1P0CW02 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ly6c1P0CW02 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ly6c1P0CW02 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ly6c1P0CW02 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ly6c1P0CW02 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ly6c1P0CW02 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ly6c1P0CW02 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ly6c1P0CW02 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Ly6c1P0CW02 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
Ly6c1P0CW02 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ly6c1P0CW02 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ly6c1P0CW02 Gm10434-201ENSMUST00000101158 471 ntBASIC10.56□□□□□ -0.72
Ly6c1P0CW02 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Ly6c1P0CW02 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Ly6c1P0CW02 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Ly6c1P0CW02 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Ly6c1P0CW02 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Ly6c1P0CW02 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms