Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Hoxa4P06798 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Hoxa4P06798 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Hoxa4P06798 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.3□□□□□ -0.44
Hoxa4P06798 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.3□□□□□ -0.44
Hoxa4P06798 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.3□□□□□ -0.44
Hoxa4P06798 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.3□□□□□ -0.44
Hoxa4P06798 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Hoxa4P06798 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.3□□□□□ -0.44
Hoxa4P06798 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Hoxa4P06798 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Hoxa4P06798 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Hoxa4P06798 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.3□□□□□ -0.44
Hoxa4P06798 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa4P06798 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.3□□□□□ -0.44
Hoxa4P06798 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.29□□□□□ -0.44
Hoxa4P06798 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hoxa4P06798 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.29□□□□□ -0.44
Hoxa4P06798 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Hoxa4P06798 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Hoxa4P06798 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.29□□□□□ -0.44
Hoxa4P06798 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Hoxa4P06798 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.29□□□□□ -0.44
Hoxa4P06798 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.29□□□□□ -0.44
Hoxa4P06798 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.29□□□□□ -0.44
Hoxa4P06798 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Hoxa4P06798 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.29□□□□□ -0.44
Hoxa4P06798 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hoxa4P06798 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.29□□□□□ -0.44
Hoxa4P06798 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Hoxa4P06798 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.29□□□□□ -0.44
Hoxa4P06798 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Hoxa4P06798 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa4P06798 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Hoxa4P06798 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxa4P06798 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hoxa4P06798 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxa4P06798 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.28□□□□□ -0.44
Hoxa4P06798 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxa4P06798 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxa4P06798 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxa4P06798 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hoxa4P06798 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxa4P06798 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.28□□□□□ -0.44
Hoxa4P06798 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxa4P06798 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Hoxa4P06798 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxa4P06798 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxa4P06798 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 106.9 ms