Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Hoxa3P02831 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.5□□□□□ -0.73
Hoxa3P02831 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Hoxa3P02831 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Hoxa3P02831 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.5□□□□□ -0.73
Hoxa3P02831 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.49□□□□□ -0.73
Hoxa3P02831 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Hoxa3P02831 Mir877-201ENSMUST00000104738 85 ntBASIC10.49□□□□□ -0.73
Hoxa3P02831 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.49□□□□□ -0.73
Hoxa3P02831 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.49□□□□□ -0.73
Hoxa3P02831 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.49□□□□□ -0.73
Hoxa3P02831 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.49□□□□□ -0.73
Hoxa3P02831 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Hoxa3P02831 Gm20482-202ENSMUST00000174729 825 ntBASIC10.49□□□□□ -0.73
Hoxa3P02831 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.49□□□□□ -0.73
Hoxa3P02831 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.49□□□□□ -0.73
Hoxa3P02831 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.49□□□□□ -0.73
Hoxa3P02831 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.49□□□□□ -0.73
Hoxa3P02831 Gm5950-201ENSMUST00000213337 772 ntBASIC10.49□□□□□ -0.73
Hoxa3P02831 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Hoxa3P02831 Gm22058-201ENSMUST00000083393 310 ntBASIC10.49□□□□□ -0.73
Hoxa3P02831 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.49□□□□□ -0.73
Hoxa3P02831 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.49□□□□□ -0.73
Hoxa3P02831 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.49□□□□□ -0.73
Hoxa3P02831 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.49□□□□□ -0.73
Hoxa3P02831 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hoxa3P02831 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.48□□□□□ -0.73
Hoxa3P02831 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Hoxa3P02831 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Hoxa3P02831 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.48□□□□□ -0.73
Hoxa3P02831 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Hoxa3P02831 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.48□□□□□ -0.73
Hoxa3P02831 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.48□□□□□ -0.73
Hoxa3P02831 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Gm2546-201ENSMUST00000182630 991 ntBASIC10.48□□□□□ -0.73
Hoxa3P02831 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.48□□□□□ -0.73
Hoxa3P02831 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.48□□□□□ -0.73
Hoxa3P02831 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.48□□□□□ -0.73
Hoxa3P02831 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.48□□□□□ -0.73
Hoxa3P02831 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.48□□□□□ -0.73
Hoxa3P02831 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.48□□□□□ -0.73
Hoxa3P02831 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Mir339-201ENSMUST00000083659 96 ntBASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms