Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
IghmP01872 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
IghmP01872 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.69□□□□□ -0.54
IghmP01872 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
IghmP01872 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
IghmP01872 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
IghmP01872 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.68□□□□□ -0.54
IghmP01872 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IghmP01872 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IghmP01872 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.68□□□□□ -0.54
IghmP01872 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.68□□□□□ -0.54
IghmP01872 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
IghmP01872 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
IghmP01872 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IghmP01872 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
IghmP01872 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
IghmP01872 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
IghmP01872 Gm9083-201ENSMUST00000120423 819 ntBASIC11.68□□□□□ -0.54
IghmP01872 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.68□□□□□ -0.54
IghmP01872 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
IghmP01872 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
IghmP01872 Gm43818-201ENSMUST00000200605 466 ntBASIC11.68□□□□□ -0.54
IghmP01872 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.68□□□□□ -0.54
IghmP01872 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
IghmP01872 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.68□□□□□ -0.54
IghmP01872 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.68□□□□□ -0.54
IghmP01872 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.68□□□□□ -0.54
IghmP01872 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.68□□□□□ -0.54
IghmP01872 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IghmP01872 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IghmP01872 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.68□□□□□ -0.54
IghmP01872 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
IghmP01872 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
IghmP01872 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
IghmP01872 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IghmP01872 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
IghmP01872 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
IghmP01872 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
IghmP01872 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IghmP01872 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.68□□□□□ -0.54
IghmP01872 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IghmP01872 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
IghmP01872 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
IghmP01872 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.68□□□□□ -0.54
IghmP01872 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
IghmP01872 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
IghmP01872 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
IghmP01872 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.67□□□□□ -0.54
IghmP01872 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
IghmP01872 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
IghmP01872 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Gm12390-201ENSMUST00000117897 397 ntBASIC11.67□□□□□ -0.54
IghmP01872 Gm12502-201ENSMUST00000120197 444 ntBASIC11.67□□□□□ -0.54
IghmP01872 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.67□□□□□ -0.54
IghmP01872 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.67□□□□□ -0.54
IghmP01872 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.67□□□□□ -0.54
IghmP01872 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
IghmP01872 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.67□□□□□ -0.54
IghmP01872 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
IghmP01872 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.67□□□□□ -0.54
IghmP01872 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
IghmP01872 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.67□□□□□ -0.54
IghmP01872 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
IghmP01872 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
IghmP01872 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
IghmP01872 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
IghmP01872 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
IghmP01872 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
IghmP01872 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
IghmP01872 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms