Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopeO89079 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.86□□□□□ -0.35
CopeO89079 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.86□□□□□ -0.35
CopeO89079 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CopeO89079 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.86□□□□□ -0.35
CopeO89079 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.86□□□□□ -0.35
CopeO89079 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CopeO89079 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CopeO89079 Gm24231-201ENSMUST00000104315 133 ntBASIC12.86□□□□□ -0.35
CopeO89079 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.86□□□□□ -0.35
CopeO89079 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.86□□□□□ -0.35
CopeO89079 Gm8213-201ENSMUST00000118191 441 ntBASIC12.86□□□□□ -0.35
CopeO89079 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.86□□□□□ -0.35
CopeO89079 Gm16296-201ENSMUST00000159905 325 ntBASIC12.86□□□□□ -0.35
CopeO89079 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Gm35960-201ENSMUST00000202712 767 ntBASIC12.86□□□□□ -0.35
CopeO89079 Gm8598-201ENSMUST00000221184 836 ntBASIC12.86□□□□□ -0.35
CopeO89079 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.86□□□□□ -0.35
CopeO89079 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.86□□□□□ -0.35
CopeO89079 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CopeO89079 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.86□□□□□ -0.35
CopeO89079 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopeO89079 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CopeO89079 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
CopeO89079 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopeO89079 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopeO89079 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopeO89079 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopeO89079 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopeO89079 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.85□□□□□ -0.35
CopeO89079 Gm10156-201ENSMUST00000122364 462 ntBASIC12.85□□□□□ -0.35
CopeO89079 Gm2231-201ENSMUST00000125661 612 ntBASIC12.85□□□□□ -0.35
CopeO89079 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CopeO89079 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CopeO89079 Proscos-202ENSMUST00000178990 666 ntBASIC12.85□□□□□ -0.35
CopeO89079 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.85□□□□□ -0.35
CopeO89079 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.85□□□□□ -0.35
CopeO89079 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.85□□□□□ -0.35
CopeO89079 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.85□□□□□ -0.35
CopeO89079 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CopeO89079 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopeO89079 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopeO89079 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.85□□□□□ -0.35
CopeO89079 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.85□□□□□ -0.35
CopeO89079 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopeO89079 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopeO89079 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
CopeO89079 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopeO89079 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.85□□□□□ -0.35
CopeO89079 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CopeO89079 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.85□□□□□ -0.35
CopeO89079 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CopeO89079 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopeO89079 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopeO89079 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.85□□□□□ -0.35
CopeO89079 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopeO89079 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.85□□□□□ -0.35
CopeO89079 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopeO89079 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopeO89079 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.84□□□□□ -0.35
CopeO89079 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CopeO89079 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CopeO89079 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CopeO89079 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopeO89079 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopeO89079 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopeO89079 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CopeO89079 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopeO89079 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms